Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
HLA-DOBP13765 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
HLA-DOBP13765 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 AC011742.3-201ENST00000439053 820 ntBASIC12.67□□□□□ -0.38
HLA-DOBP13765 AC007274.1-201ENST00000439805 662 ntBASIC12.67□□□□□ -0.38
HLA-DOBP13765 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 MIR3188-201ENST00000583494 85 ntBASIC12.67□□□□□ -0.38
HLA-DOBP13765 AC138649.2-201ENST00000615886 705 ntBASIC12.67□□□□□ -0.38
HLA-DOBP13765 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 AC073548.1-201ENST00000624088 1882 ntBASIC12.67□□□□□ -0.38
HLA-DOBP13765 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 MEX3B-202ENST00000558133 4333 ntBASIC12.67□□□□□ -0.38
HLA-DOBP13765 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 DMBT1P1-203ENST00000636837 4628 ntBASIC12.67□□□□□ -0.38
HLA-DOBP13765 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
HLA-DOBP13765 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DOBP13765 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.66□□□□□ -0.38
HLA-DOBP13765 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DOBP13765 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DOBP13765 OR8T1P-201ENST00000421347 918 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms