Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
BMP4P12644 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
BMP4P12644 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BMP4P12644 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
BMP4P12644 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
BMP4P12644 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 FAM86MP-201ENST00000340703 885 ntBASIC13.08□□□□□ -0.32
BMP4P12644 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.08□□□□□ -0.32
BMP4P12644 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.08□□□□□ -0.32
BMP4P12644 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.08□□□□□ -0.32
BMP4P12644 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.08□□□□□ -0.32
BMP4P12644 MIR4525-201ENST00000580000 75 ntBASIC13.08□□□□□ -0.32
BMP4P12644 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.08□□□□□ -0.32
BMP4P12644 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 AL157414.3-201ENST00000624276 1954 ntBASIC13.08□□□□□ -0.32
BMP4P12644 AL731571.1-201ENST00000617058 5428 ntBASIC13.08□□□□□ -0.32
BMP4P12644 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
BMP4P12644 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
BMP4P12644 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
BMP4P12644 MSTO2P-201ENST00000314835 1709 ntBASIC13.08□□□□□ -0.32
BMP4P12644 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.08□□□□□ -0.32
BMP4P12644 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.08□□□□□ -0.32
BMP4P12644 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
BMP4P12644 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BMP4P12644 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BMP4P12644 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
BMP4P12644 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.07□□□□□ -0.32
BMP4P12644 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BMP4P12644 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.07□□□□□ -0.32
BMP4P12644 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.07□□□□□ -0.32
BMP4P12644 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.07□□□□□ -0.32
BMP4P12644 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.07□□□□□ -0.32
BMP4P12644 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.07□□□□□ -0.32
BMP4P12644 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.07□□□□□ -0.32
BMP4P12644 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 AL021155.1-201ENST00000438808 2637 ntBASIC13.07□□□□□ -0.32
BMP4P12644 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.07□□□□□ -0.32
BMP4P12644 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.07□□□□□ -0.32
BMP4P12644 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 AC006001.1-201ENST00000325130 474 ntBASIC13.07□□□□□ -0.32
BMP4P12644 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BMP4P12644 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
BMP4P12644 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms