Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 AC019109.1-201ENST00000401725 1874 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
FREM3P0C091 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 AC098935.1-201ENST00000446057 611 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 RNA5SP417-201ENST00000516459 108 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 NDUFB10P1-201ENST00000567319 521 ntBASIC12.8□□□□□ -0.36
FREM3P0C091 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.8□□□□□ -0.36
FREM3P0C091 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.8□□□□□ -0.36
FREM3P0C091 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FREM3P0C091 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.8□□□□□ -0.36
FREM3P0C091 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 AC103592.1-201ENST00000394513 664 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.79□□□□□ -0.36
FREM3P0C091 DPY19L2P5-201ENST00000456300 331 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 RN7SL8P-201ENST00000461771 266 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.79□□□□□ -0.36
FREM3P0C091 AC019193.1-201ENST00000506678 823 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 AC138701.2-201ENST00000553634 226 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 IL9RP3-201ENST00000442856 1674 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 AC105206.1-202ENST00000314927 2368 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.79□□□□□ -0.36
FREM3P0C091 MIR645-201ENST00000385283 94 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 RPL8P2-201ENST00000430538 502 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.79□□□□□ -0.36
FREM3P0C091 LDHBP1-201ENST00000455730 1119 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 ORAOV1P1-201ENST00000503108 395 ntBASIC12.79□□□□□ -0.36
FREM3P0C091 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.79□□□□□ -0.36
FREM3P0C091 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.79□□□□□ -0.36
FREM3P0C091 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
FREM3P0C091 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms