Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.9■□□□□ 0.14
TPM3P06753 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TPM3P06753 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
TPM3P06753 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM3P06753 AC011481.3-201ENST00000623895 5594 ntBASIC15.9■□□□□ 0.14
TPM3P06753 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TPM3P06753 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC15.9■□□□□ 0.14
TPM3P06753 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TPM3P06753 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TPM3P06753 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.14
TPM3P06753 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TPM3P06753 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM3P06753 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM3P06753 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 TPM3P8-201ENST00000330554 643 ntBASIC15.89■□□□□ 0.13
TPM3P06753 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TPM3P06753 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM3P06753 METTL21AP1-201ENST00000438852 635 ntBASIC15.89■□□□□ 0.13
TPM3P06753 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.89■□□□□ 0.13
TPM3P06753 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM3P06753 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TPM3P06753 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM3P06753 AC093214.1-201ENST00000511688 1107 ntBASIC15.89■□□□□ 0.13
TPM3P06753 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM3P06753 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.89■□□□□ 0.13
TPM3P06753 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TPM3P06753 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 AC145423.3-201ENST00000615987 467 ntBASIC15.89■□□□□ 0.13
TPM3P06753 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM3P06753 AC009093.2-202ENST00000620513 2079 ntBASIC15.89■□□□□ 0.13
TPM3P06753 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.89■□□□□ 0.13
TPM3P06753 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.89■□□□□ 0.13
TPM3P06753 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.89■□□□□ 0.13
TPM3P06753 KRT18P28-201ENST00000453838 1332 ntBASIC15.89■□□□□ 0.13
TPM3P06753 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TPM3P06753 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TPM3P06753 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM3P06753 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC15.88■□□□□ 0.13
TPM3P06753 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 AC015819.3-201ENST00000624305 2674 ntBASIC15.88■□□□□ 0.13
TPM3P06753 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 AC010336.1-201ENST00000539278 4739 ntBASIC15.88■□□□□ 0.13
TPM3P06753 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.88■□□□□ 0.13
TPM3P06753 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.88■□□□□ 0.13
TPM3P06753 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TPM3P06753 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.88■□□□□ 0.13
TPM3P06753 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms