Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AL133338.1-201ENST00000565695 1517 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 MIR645-201ENST00000385283 94 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC098934.1-203ENST00000442868 1262 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 RPSAP15-201ENST00000448168 861 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 KRT8P13-201ENST00000463294 1010 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 ZNF767P-206ENST00000513792 565 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 ALG1L13P-202ENST00000519320 584 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 MIR6769A-201ENST00000617340 73 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 MIR6869-201ENST00000619434 62 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC092053.3-201ENST00000641308 4975 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC245140.2-201ENST00000624054 1939 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 AL137784.3-201ENST00000623858 2288 ntBASIC12.44□□□□□ -0.42
NPIPB4C9JG80 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 TBC1D27-202ENST00000424239 1573 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 ELK2AP-201ENST00000392510 1007 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 AC073869.2-201ENST00000417338 1026 ntBASIC12.43□□□□□ -0.42
NPIPB4C9JG80 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.43□□□□□ -0.42
NPIPB4C9JG80 RN7SL258P-201ENST00000478664 300 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms