Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 RN7SL736P-201ENST00000613111 269 ntBASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AP003419.4-201ENST00000616071 517 ntBASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20BQ9P0W2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 OR5BD1P-201ENST00000532527 817 ntBASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 AC007250.1-201ENST00000608934 338 ntBASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 MIR7845-201ENST00000618396 99 ntBASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HMG20BQ9P0W2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 AGAP10P-201ENST00000454844 2418 ntBASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 RPL17P11-201ENST00000417593 544 ntBASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HMG20BQ9P0W2 AC145285.5-201ENST00000562217 361 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms