Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC004554.1-201ENST00000422830 1468 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 RPL3P2-204ENST00000413027 1203 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 SCARNA12-201ENST00000459155 270 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 MT3-203ENST00000565838 421 ntTSL 3 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC016629.1-201ENST00000596579 586 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC106872.11-201ENST00000605838 421 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC051619.9-201ENST00000623237 597 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 PXK-210ENST00000479241 2817 ntTSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 AC135782.3-201ENST00000562782 2105 ntBASIC20.32■□□□□ 0.84
SIN3AQ96ST3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIN3AQ96ST3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 AC019193.1-201ENST00000506678 823 ntBASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 AC091769.1-201ENST00000619576 568 ntBASIC20.31■□□□□ 0.84
SIN3AQ96ST3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIN3AQ96ST3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 EEF1DP2-201ENST00000433698 843 ntBASIC20.3■□□□□ 0.84
SIN3AQ96ST3 AL627422.1-201ENST00000434104 580 ntBASIC20.3■□□□□ 0.84
SIN3AQ96ST3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 STK24P1-201ENST00000455035 1291 ntBASIC20.3■□□□□ 0.84
SIN3AQ96ST3 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 ORAOV1P1-201ENST00000503108 395 ntBASIC20.3■□□□□ 0.84
SIN3AQ96ST3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.3■□□□□ 0.84
SIN3AQ96ST3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms