Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AC007952.5-201ENST00000572818 1486 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 AC015819.3-201ENST00000624305 2674 ntBASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHAMP1Q96JM3 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 GHET1-201ENST00000627071 1906 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 MIR600HG-201ENST00000449175 5984 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 KRT18P8-201ENST00000581937 1246 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 RN7SL219P-201ENST00000582872 296 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AC021016.3-201ENST00000608367 477 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AL033527.4-201ENST00000641026 673 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AC061965.1-201ENST00000560524 1465 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 PI4KAP2-201ENST00000360806 2080 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 MSNP1-201ENST00000511640 1732 ntBASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHAMP1Q96JM3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 PPP1R26P2-201ENST00000611403 3595 ntBASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 AL512384.1-201ENST00000406683 331 ntBASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 AC026954.1-201ENST00000429771 1293 ntBASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 AC092580.1-201ENST00000433998 658 ntBASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 RBM8B-201ENST00000555532 525 ntBASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.38■□□□□ 0.21
CHAMP1Q96JM3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms