Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CDK4P1-201ENST00000454213 828 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 DPY19L2P4-201ENST00000479881 442 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 NDUFB2P1-201ENST00000506966 295 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 MBP-230ENST00000528160 584 ntTSL 5 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 AC010202.1-201ENST00000551181 405 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 MIR3940-201ENST00000579148 102 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 AC132812.1-201ENST00000583145 892 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 KRT8P25-201ENST00000473150 1456 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 HSPA7-201ENST00000445535 1927 ntBASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KLHDC9Q8NEP7 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 RN7SL523P-201ENST00000484401 298 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AC011431.1-201ENST00000512971 230 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 OR4A49P-201ENST00000527050 632 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AC023051.2-201ENST00000541141 460 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 CR392039.1-201ENST00000623217 204 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AC061965.1-201ENST00000560524 1465 ntBASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KLHDC9Q8NEP7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 AC040160.2-201ENST00000623816 1675 ntBASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 LINC02228-204ENST00000642115 2962 ntBASIC15.23■□□□□ 0.03
KLHDC9Q8NEP7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms