Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 PEBP1P2-201ENST00000603980 558 ntBASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AC027601.5-201ENST00000624065 2482 ntBASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AC007191.1-201ENST00000623179 2995 ntBASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AC103702.1-201ENST00000548801 2630 ntBASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 FMO6P-201ENST00000236166 1620 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 GGTLC4P-201ENST00000402176 664 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 FAM21EP-201ENST00000417804 985 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 AC063952.3-201ENST00000467756 308 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 AC092862.1-201ENST00000541534 533 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 CES1P2-201ENST00000566467 1242 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 MIR4326-201ENST00000582203 59 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 CYP4F36P-201ENST00000589193 186 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 MIR6746-201ENST00000620971 63 ntBASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.27■□□□□ 0.2
SHROOM1Q2M3G4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SHROOM1Q2M3G4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 PTGER4P2-201ENST00000328411 252 ntBASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 OR10N1P-201ENST00000392758 869 ntBASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 PSAT1P2-201ENST00000426107 972 ntBASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 PTGER4P3-201ENST00000458150 252 ntBASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC16.26■□□□□ 0.19
SHROOM1Q2M3G4 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms