Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.53■□□□□ 0.24
NEDD4P46934 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
NEDD4P46934 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NEDD4P46934 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 HADH-202ENST00000403312 1752 ntTSL 5 BASIC16.53■□□□□ 0.24
NEDD4P46934 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.53■□□□□ 0.24
NEDD4P46934 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NEDD4P46934 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.53■□□□□ 0.24
NEDD4P46934 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.53■□□□□ 0.24
NEDD4P46934 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.53■□□□□ 0.24
NEDD4P46934 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.52■□□□□ 0.24
NEDD4P46934 AC026316.1-201ENST00000398900 414 ntBASIC16.52■□□□□ 0.24
NEDD4P46934 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 AC019109.1-201ENST00000401725 1874 ntBASIC16.52■□□□□ 0.24
NEDD4P46934 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.52■□□□□ 0.24
NEDD4P46934 EEF1DP2-201ENST00000433698 843 ntBASIC16.52■□□□□ 0.24
NEDD4P46934 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NEDD4P46934 SCARNA12-201ENST00000459155 270 ntBASIC16.52■□□□□ 0.24
NEDD4P46934 RN7SL81P-201ENST00000493781 261 ntBASIC16.52■□□□□ 0.24
NEDD4P46934 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.52■□□□□ 0.24
NEDD4P46934 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.52■□□□□ 0.24
NEDD4P46934 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.52■□□□□ 0.24
NEDD4P46934 MIR4265-201ENST00000582152 99 ntBASIC16.52■□□□□ 0.24
NEDD4P46934 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.52■□□□□ 0.24
NEDD4P46934 AC103810.10-201ENST00000606504 343 ntBASIC16.52■□□□□ 0.24
NEDD4P46934 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NEDD4P46934 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NEDD4P46934 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NEDD4P46934 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NEDD4P46934 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NEDD4P46934 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEDD4P46934 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.52■□□□□ 0.23
NEDD4P46934 NCLP1-201ENST00000445357 1963 ntBASIC16.52■□□□□ 0.23
NEDD4P46934 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEDD4P46934 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEDD4P46934 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
NEDD4P46934 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEDD4P46934 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.23
NEDD4P46934 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
NEDD4P46934 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NEDD4P46934 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.52■□□□□ 0.23
NEDD4P46934 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.52■□□□□ 0.23
NEDD4P46934 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NEDD4P46934 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NEDD4P46934 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.51■□□□□ 0.23
NEDD4P46934 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.51■□□□□ 0.23
NEDD4P46934 ERP29P1-201ENST00000442902 706 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 AC138701.2-201ENST00000553634 226 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 KRT18P8-201ENST00000581937 1246 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.51■□□□□ 0.23
NEDD4P46934 AC242376.2-201ENST00000619355 883 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 CR392039.2-201ENST00000623182 509 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 AL161773.1-201ENST00000624845 863 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NEDD4P46934 AL139424.3-202ENST00000641619 917 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.51■□□□□ 0.23
NEDD4P46934 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.51■□□□□ 0.23
NEDD4P46934 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NEDD4P46934 PDXDC2P-206ENST00000534700 1315 ntBASIC16.51■□□□□ 0.23
NEDD4P46934 AC074138.1-201ENST00000611182 1303 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms