Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 FRMPD2B-201ENST00000431305 1347 ntBASIC11.61□□□□□ -0.55
CEACAM3P40198 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CEACAM3P40198 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.61□□□□□ -0.55
CEACAM3P40198 Z97180.1-201ENST00000445173 988 ntBASIC11.61□□□□□ -0.55
CEACAM3P40198 AC006335.1-201ENST00000445200 547 ntBASIC11.61□□□□□ -0.55
CEACAM3P40198 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 BX284668.4-201ENST00000453917 508 ntBASIC11.61□□□□□ -0.55
CEACAM3P40198 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC11.61□□□□□ -0.55
CEACAM3P40198 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.61□□□□□ -0.55
CEACAM3P40198 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC11.61□□□□□ -0.55
CEACAM3P40198 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 AL645939.5-201ENST00000606834 243 ntBASIC11.61□□□□□ -0.55
CEACAM3P40198 AC244093.1-201ENST00000610837 814 ntBASIC11.61□□□□□ -0.55
CEACAM3P40198 Z82170.1-201ENST00000625081 3192 ntBASIC11.61□□□□□ -0.55
CEACAM3P40198 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CEACAM3P40198 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CEACAM3P40198 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CEACAM3P40198 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 TUBBP5-203ENST00000508529 1334 ntBASIC11.6□□□□□ -0.55
CEACAM3P40198 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.6□□□□□ -0.55
CEACAM3P40198 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
CEACAM3P40198 TCAF1P1-201ENST00000414990 2232 ntBASIC11.6□□□□□ -0.55
CEACAM3P40198 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CEACAM3P40198 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CEACAM3P40198 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms