Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN1P35523 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN1P35523 RPSAP52-203ENST00000622976 1023 ntBASIC16.15■□□□□ 0.18
CLCN1P35523 AC092723.2-201ENST00000624955 793 ntBASIC16.15■□□□□ 0.18
CLCN1P35523 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN1P35523 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
CLCN1P35523 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLCN1P35523 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN1P35523 AC002350.2-201ENST00000623894 1828 ntBASIC16.15■□□□□ 0.18
CLCN1P35523 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
CLCN1P35523 AC005696.4-201ENST00000614400 3147 ntBASIC16.14■□□□□ 0.18
CLCN1P35523 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
CLCN1P35523 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 CRB3P1-201ENST00000449338 276 ntBASIC16.14■□□□□ 0.17
CLCN1P35523 AC093433.1-201ENST00000458048 571 ntBASIC16.14■□□□□ 0.17
CLCN1P35523 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.14■□□□□ 0.17
CLCN1P35523 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.14■□□□□ 0.17
CLCN1P35523 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 CU634019.7-201ENST00000624153 1185 ntBASIC16.14■□□□□ 0.17
CLCN1P35523 FP236241.2-201ENST00000624906 1185 ntBASIC16.14■□□□□ 0.17
CLCN1P35523 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.14■□□□□ 0.17
CLCN1P35523 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCN1P35523 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCN1P35523 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 MSTO2P-201ENST00000314835 1709 ntBASIC16.14■□□□□ 0.17
CLCN1P35523 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCN1P35523 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.13■□□□□ 0.17
CLCN1P35523 ACTBP8-201ENST00000403258 1108 ntBASIC16.13■□□□□ 0.17
CLCN1P35523 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC16.13■□□□□ 0.17
CLCN1P35523 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.13■□□□□ 0.17
CLCN1P35523 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.13■□□□□ 0.17
CLCN1P35523 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 AP001063.1-201ENST00000568332 529 ntBASIC16.13■□□□□ 0.17
CLCN1P35523 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.13■□□□□ 0.17
CLCN1P35523 AL033527.5-201ENST00000641382 801 ntBASIC16.13■□□□□ 0.17
CLCN1P35523 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLCN1P35523 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLCN1P35523 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms