Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 ABCD1P2-201ENST00000429313 1601 ntBASIC14.4□□□□□ -0.1
PTPN3P26045 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.4□□□□□ -0.1
PTPN3P26045 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PTPN3P26045 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.4□□□□□ -0.1
PTPN3P26045 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN3P26045 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.4□□□□□ -0.1
PTPN3P26045 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.4□□□□□ -0.1
PTPN3P26045 TUBBP5-203ENST00000508529 1334 ntBASIC14.4□□□□□ -0.1
PTPN3P26045 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PTPN3P26045 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
PTPN3P26045 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.39□□□□□ -0.11
PTPN3P26045 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 AC015909.3-201ENST00000572855 1794 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 AL157791.1-201ENST00000553667 1699 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 AC025183.3-201ENST00000623526 1482 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
PTPN3P26045 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 AC239868.1-201ENST00000369385 493 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.39□□□□□ -0.11
PTPN3P26045 AC005740.1-201ENST00000515639 522 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.39□□□□□ -0.11
PTPN3P26045 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.39□□□□□ -0.11
PTPN3P26045 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.39□□□□□ -0.11
PTPN3P26045 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.39□□□□□ -0.11
PTPN3P26045 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 MEG3_2.1-201ENST00000611456 105 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 AL359845.1-201ENST00000458202 1648 ntBASIC14.39□□□□□ -0.11
PTPN3P26045 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.39□□□□□ -0.11
PTPN3P26045 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTPN3P26045 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.39□□□□□ -0.11
PTPN3P26045 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PTPN3P26045 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN3P26045 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN3P26045 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN3P26045 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PTPN3P26045 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTPN3P26045 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.38□□□□□ -0.11
PTPN3P26045 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.38□□□□□ -0.11
PTPN3P26045 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTPN3P26045 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms