Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.63□□□□□ -0.39
CTSSP25774 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.63□□□□□ -0.39
CTSSP25774 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CTSSP25774 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSSP25774 KRT18P15-201ENST00000458108 1291 ntBASIC12.63□□□□□ -0.39
CTSSP25774 RPL18AP3-201ENST00000462885 528 ntBASIC12.63□□□□□ -0.39
CTSSP25774 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.63□□□□□ -0.39
CTSSP25774 AP003398.1-201ENST00000531124 318 ntBASIC12.63□□□□□ -0.39
CTSSP25774 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 RN7SL665P-201ENST00000578793 300 ntBASIC12.63□□□□□ -0.39
CTSSP25774 MIR4649-201ENST00000582839 64 ntBASIC12.63□□□□□ -0.39
CTSSP25774 SIGLEC22P-201ENST00000599104 714 ntBASIC12.63□□□□□ -0.39
CTSSP25774 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.63□□□□□ -0.39
CTSSP25774 AP000322.3-201ENST00000608665 388 ntBASIC12.63□□□□□ -0.39
CTSSP25774 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CTSSP25774 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSSP25774 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSSP25774 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSSP25774 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CTSSP25774 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSSP25774 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSSP25774 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CTSSP25774 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSSP25774 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 HIST2H2BA-201ENST00000412169 381 ntBASIC12.62□□□□□ -0.39
CTSSP25774 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.62□□□□□ -0.39
CTSSP25774 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.62□□□□□ -0.39
CTSSP25774 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSSP25774 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.62□□□□□ -0.39
CTSSP25774 AC098934.1-203ENST00000442868 1262 ntBASIC12.62□□□□□ -0.39
CTSSP25774 ERP29P1-201ENST00000442902 706 ntBASIC12.62□□□□□ -0.39
CTSSP25774 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.62□□□□□ -0.39
CTSSP25774 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 HERC2P11-201ENST00000562845 725 ntBASIC12.62□□□□□ -0.39
CTSSP25774 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSSP25774 AC100756.2-201ENST00000569537 736 ntBASIC12.62□□□□□ -0.39
CTSSP25774 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 KRT18P8-201ENST00000581937 1246 ntBASIC12.62□□□□□ -0.39
CTSSP25774 RN7SL470P-201ENST00000583069 259 ntBASIC12.62□□□□□ -0.39
CTSSP25774 AC084781.1-201ENST00000613737 656 ntBASIC12.62□□□□□ -0.39
CTSSP25774 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.62□□□□□ -0.39
CTSSP25774 AP001065.2-201ENST00000617205 644 ntBASIC12.62□□□□□ -0.39
CTSSP25774 AC025262.2-201ENST00000623975 1056 ntBASIC12.62□□□□□ -0.39
CTSSP25774 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSSP25774 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSSP25774 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSSP25774 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSSP25774 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSSP25774 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CTSSP25774 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms