Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PKHD1P08F94 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC8.63□□□□□ -1.03
PKHD1P08F94 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PKHD1P08F94 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
PKHD1P08F94 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PKHD1P08F94 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PKHD1P08F94 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
PKHD1P08F94 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC8.63□□□□□ -1.03
PKHD1P08F94 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
PKHD1P08F94 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC8.63□□□□□ -1.03
PKHD1P08F94 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 TMEM256P1-201ENST00000430550 340 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC016304.1-201ENST00000476363 413 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 AC104212.2-201ENST00000478813 628 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC020763.4-201ENST00000623414 4170 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 FP325317.1-201ENST00000539936 1042 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC092535.4-201ENST00000609548 397 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 MDC1-209ENST00000613547 830 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 Z97653.2-201ENST00000623057 1418 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
PKHD1P08F94 TBC1D3P1-201ENST00000590047 1693 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC8.62□□□□□ -1.03
PKHD1P08F94 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 RPL18P1-201ENST00000497218 552 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 NME1-209ENST00000511355 1645 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC8.62□□□□□ -1.03
PKHD1P08F94 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC8.62□□□□□ -1.03
PKHD1P08F94 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC8.62□□□□□ -1.03
PKHD1P08F94 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC8.62□□□□□ -1.03
PKHD1P08F94 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PKHD1P08F94 MST1P2-201ENST00000457982 2291 ntBASIC8.62□□□□□ -1.03
PKHD1P08F94 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PKHD1P08F94 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
PKHD1P08F94 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
PKHD1P08F94 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PKHD1P08F94 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PKHD1P08F94 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC8.61□□□□□ -1.03
PKHD1P08F94 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC8.61□□□□□ -1.03
PKHD1P08F94 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PKHD1P08F94 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC8.61□□□□□ -1.03
PKHD1P08F94 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC8.61□□□□□ -1.03
PKHD1P08F94 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC8.61□□□□□ -1.03
PKHD1P08F94 MIR602-201ENST00000384960 98 ntBASIC8.61□□□□□ -1.03
PKHD1P08F94 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms