Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC11.27□□□□□ -0.61
APOC3P02656 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
APOC3P02656 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC11.27□□□□□ -0.61
APOC3P02656 TBC1D16-202ENST00000340848 4244 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
APOC3P02656 AC012676.5-201ENST00000624337 1955 ntBASIC11.27□□□□□ -0.61
APOC3P02656 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 MSTO2P-201ENST00000314835 1709 ntBASIC11.26□□□□□ -0.61
APOC3P02656 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC3P02656 ATP6V0A4-203ENST00000393054 3090 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
APOC3P02656 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC3P02656 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC3P02656 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.26□□□□□ -0.61
APOC3P02656 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC3P02656 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC3P02656 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC3P02656 AP001462.1-201ENST00000594089 452 ntBASIC11.26□□□□□ -0.61
APOC3P02656 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 AC073389.1-201ENST00000595595 795 ntBASIC11.26□□□□□ -0.61
APOC3P02656 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
APOC3P02656 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.26□□□□□ -0.61
APOC3P02656 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
APOC3P02656 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
APOC3P02656 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
APOC3P02656 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
APOC3P02656 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC3P02656 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC11.26□□□□□ -0.61
APOC3P02656 C1S-221ENST00000617865 2844 ntTSL 5 BASIC11.26□□□□□ -0.61
APOC3P02656 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 AC015909.3-201ENST00000572855 1794 ntBASIC11.26□□□□□ -0.61
APOC3P02656 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
APOC3P02656 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
APOC3P02656 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 TGOLN2-202ENST00000377386 6489 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 ZNF572-201ENST00000319286 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 SALL4P6-201ENST00000429385 1691 ntBASIC11.25□□□□□ -0.61
APOC3P02656 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
APOC3P02656 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
APOC3P02656 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.25□□□□□ -0.61
APOC3P02656 TSPY5P-201ENST00000426936 936 ntBASIC11.25□□□□□ -0.61
APOC3P02656 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.25□□□□□ -0.61
APOC3P02656 SLED1-202ENST00000512051 380 ntBASIC11.25□□□□□ -0.61
APOC3P02656 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
APOC3P02656 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.25□□□□□ -0.61
APOC3P02656 OR7E47P-204ENST00000575924 449 ntBASIC11.25□□□□□ -0.61
APOC3P02656 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
APOC3P02656 AL591684.3-201ENST00000605187 298 ntBASIC11.25□□□□□ -0.61
APOC3P02656 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
APOC3P02656 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms