Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
NR2E3Q9Y5X4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.17■■□□□ 1.62
NR2E3Q9Y5X4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NR2E3Q9Y5X4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 AL499627.2-201ENST00000606283 725 ntBASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.15■■□□□ 1.62
NR2E3Q9Y5X4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NR2E3Q9Y5X4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
NR2E3Q9Y5X4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
NR2E3Q9Y5X4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.14■■□□□ 1.62
NR2E3Q9Y5X4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.14■■□□□ 1.61
NR2E3Q9Y5X4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
NR2E3Q9Y5X4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 NCF1B-203ENST00000435988 1254 ntBASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NR2E3Q9Y5X4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 BID-214ENST00000617586 542 ntTSL 5 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.12■■□□□ 1.61
NR2E3Q9Y5X4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.11■■□□□ 1.61
NR2E3Q9Y5X4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NR2E3Q9Y5X4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NR2E3Q9Y5X4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.11■■□□□ 1.61
NR2E3Q9Y5X4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
NR2E3Q9Y5X4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NR2E3Q9Y5X4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.1■■□□□ 1.61
NR2E3Q9Y5X4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NR2E3Q9Y5X4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.1■■□□□ 1.61
NR2E3Q9Y5X4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 CROCCP5-201ENST00000436658 830 ntBASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
NR2E3Q9Y5X4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
NR2E3Q9Y5X4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.08■■□□□ 1.61
NR2E3Q9Y5X4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.08■■□□□ 1.61
NR2E3Q9Y5X4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.08■■□□□ 1.61
NR2E3Q9Y5X4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NR2E3Q9Y5X4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.08■■□□□ 1.6
NR2E3Q9Y5X4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NR2E3Q9Y5X4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NR2E3Q9Y5X4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.07■■□□□ 1.6
NR2E3Q9Y5X4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
NR2E3Q9Y5X4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NR2E3Q9Y5X4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NR2E3Q9Y5X4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.07■■□□□ 1.6
NR2E3Q9Y5X4 AC131274.2-201ENST00000580697 1507 ntBASIC25.07■■□□□ 1.6
NR2E3Q9Y5X4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 GPX1P1-201ENST00000388829 606 ntBASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NR2E3Q9Y5X4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
NR2E3Q9Y5X4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.05■■□□□ 1.6
NR2E3Q9Y5X4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.05■■□□□ 1.6
NR2E3Q9Y5X4 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.05■■□□□ 1.6
NR2E3Q9Y5X4 AC093827.2-201ENST00000512654 315 ntBASIC25.05■■□□□ 1.6
NR2E3Q9Y5X4 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.05■■□□□ 1.6
NR2E3Q9Y5X4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NR2E3Q9Y5X4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 615.9 ms