Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PCDHB7Q9Y5E2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 AC133637.1-201ENST00000624115 1537 ntBASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB7Q9Y5E2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB7Q9Y5E2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB7Q9Y5E2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB7Q9Y5E2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB7Q9Y5E2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB7Q9Y5E2 YBX1P1-201ENST00000445822 960 ntBASIC24.34■■□□□ 1.49
PCDHB7Q9Y5E2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.34■■□□□ 1.49
PCDHB7Q9Y5E2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB7Q9Y5E2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 IGHV3-19-201ENST00000521488 291 ntBASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 AL358852.1-201ENST00000623174 1268 ntBASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
PCDHB7Q9Y5E2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHB7Q9Y5E2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB7Q9Y5E2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB7Q9Y5E2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHB7Q9Y5E2 FP325331.1-202ENST00000623531 1380 ntBASIC24.31■■□□□ 1.48
PCDHB7Q9Y5E2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB7Q9Y5E2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB7Q9Y5E2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.31■■□□□ 1.48
PCDHB7Q9Y5E2 AL499627.2-201ENST00000606283 725 ntBASIC24.31■■□□□ 1.48
PCDHB7Q9Y5E2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 MIR572-201ENST00000384983 95 ntBASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB7Q9Y5E2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHB7Q9Y5E2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PCDHB7Q9Y5E2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB7Q9Y5E2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms