Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
LSM4Q9Y4Z0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
LSM4Q9Y4Z0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LSM4Q9Y4Z0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 GUSBP5-202ENST00000510805 1989 ntBASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 AC022616.5-201ENST00000518796 181 ntBASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 LINC00526-201ENST00000581067 1875 ntBASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSM4Q9Y4Z0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSM4Q9Y4Z0 AC008406.3-201ENST00000620001 1374 ntBASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 KRT125P-201ENST00000546827 989 ntBASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSM4Q9Y4Z0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 BX664725.1-201ENST00000438252 379 ntBASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 MIR4787-201ENST00000607364 84 ntBASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 ECEL1P1-201ENST00000373592 1742 ntBASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 AC127496.7-201ENST00000625110 1798 ntBASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
LSM4Q9Y4Z0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.9■□□□□ 0.46
LSM4Q9Y4Z0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms