Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.49■□□□□ 0.55
LSM5Q9Y4Y9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LSM5Q9Y4Y9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.47■□□□□ 0.55
LSM5Q9Y4Y9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM5Q9Y4Y9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LSM5Q9Y4Y9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LSM5Q9Y4Y9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM5Q9Y4Y9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 ESRRAP2-201ENST00000418437 1549 ntBASIC18.44■□□□□ 0.54
LSM5Q9Y4Y9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
LSM5Q9Y4Y9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms