Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC009102.2-201ENST00000606772 1639 ntBASIC20.52■□□□□ 0.88
RPH3AQ9Y2J0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPH3AQ9Y2J0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPH3AQ9Y2J0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPH3AQ9Y2J0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.51■□□□□ 0.87
RPH3AQ9Y2J0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.51■□□□□ 0.87
RPH3AQ9Y2J0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.51■□□□□ 0.87
RPH3AQ9Y2J0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.51■□□□□ 0.87
RPH3AQ9Y2J0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPH3AQ9Y2J0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RPH3AQ9Y2J0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPH3AQ9Y2J0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 SRD5A1P1-201ENST00000442297 786 ntBASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RPH3AQ9Y2J0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPH3AQ9Y2J0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPH3AQ9Y2J0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPH3AQ9Y2J0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RPH3AQ9Y2J0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPH3AQ9Y2J0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPH3AQ9Y2J0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RPH3AQ9Y2J0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
RPH3AQ9Y2J0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
RPH3AQ9Y2J0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
RPH3AQ9Y2J0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 AC092666.2-201ENST00000613287 246 ntBASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPH3AQ9Y2J0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.44■□□□□ 0.86
RPH3AQ9Y2J0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.43■□□□□ 0.86
RPH3AQ9Y2J0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.86
RPH3AQ9Y2J0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPH3AQ9Y2J0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPH3AQ9Y2J0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPH3AQ9Y2J0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPH3AQ9Y2J0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPH3AQ9Y2J0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms