Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.56
NINLQ9Y2I6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
NINLQ9Y2I6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.01■■■□□ 2.55
NINLQ9Y2I6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
NINLQ9Y2I6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC31.01■■■□□ 2.55
NINLQ9Y2I6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
NINLQ9Y2I6 CA15P2-201ENST00000611168 834 ntBASIC31.01■■■□□ 2.55
NINLQ9Y2I6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
NINLQ9Y2I6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31■■■□□ 2.55
NINLQ9Y2I6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31■■■□□ 2.55
NINLQ9Y2I6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC31■■■□□ 2.55
NINLQ9Y2I6 BX842568.3-201ENST00000418104 571 ntBASIC31■■■□□ 2.55
NINLQ9Y2I6 pRNA.6-201ENST00000610482 90 ntBASIC31■■■□□ 2.55
NINLQ9Y2I6 pRNA.5-201ENST00000612139 90 ntBASIC31■■■□□ 2.55
NINLQ9Y2I6 pRNA.11-201ENST00000618423 90 ntBASIC31■■■□□ 2.55
NINLQ9Y2I6 pRNA.13-201ENST00000619112 90 ntBASIC31■■■□□ 2.55
NINLQ9Y2I6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.99■■■□□ 2.55
NINLQ9Y2I6 FP325331.1-202ENST00000623531 1380 ntBASIC30.99■■■□□ 2.55
NINLQ9Y2I6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NINLQ9Y2I6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
NINLQ9Y2I6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
NINLQ9Y2I6 AL139125.2-201ENST00000623134 1869 ntBASIC30.99■■■□□ 2.55
NINLQ9Y2I6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
NINLQ9Y2I6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
NINLQ9Y2I6 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.98■■■□□ 2.55
NINLQ9Y2I6 AL499627.2-201ENST00000606283 725 ntBASIC30.98■■■□□ 2.55
NINLQ9Y2I6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.98■■■□□ 2.55
NINLQ9Y2I6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
NINLQ9Y2I6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC30.98■■■□□ 2.55
NINLQ9Y2I6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NINLQ9Y2I6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.97■■■□□ 2.55
NINLQ9Y2I6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
NINLQ9Y2I6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.96■■■□□ 2.55
NINLQ9Y2I6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
NINLQ9Y2I6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.96■■■□□ 2.55
NINLQ9Y2I6 MPST-208ENST00000628507 698 ntTSL 5 BASIC30.96■■■□□ 2.55
NINLQ9Y2I6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 AC099791.1-201ENST00000416440 715 ntBASIC30.95■■■□□ 2.55
NINLQ9Y2I6 DUX4L4-201ENST00000566884 1269 ntBASIC30.95■■■□□ 2.55
NINLQ9Y2I6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
NINLQ9Y2I6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
NINLQ9Y2I6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
NINLQ9Y2I6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC30.95■■■□□ 2.54
NINLQ9Y2I6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NINLQ9Y2I6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NINLQ9Y2I6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NINLQ9Y2I6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
NINLQ9Y2I6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.93■■■□□ 2.54
NINLQ9Y2I6 AC233992.3-201ENST00000607491 485 ntBASIC30.93■■■□□ 2.54
NINLQ9Y2I6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NINLQ9Y2I6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NINLQ9Y2I6 AC144652.1-201ENST00000609974 1624 ntBASIC30.93■■■□□ 2.54
NINLQ9Y2I6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
NINLQ9Y2I6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.92■■■□□ 2.54
NINLQ9Y2I6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC30.92■■■□□ 2.54
NINLQ9Y2I6 LINC01124-201ENST00000409786 2117 ntBASIC30.92■■■□□ 2.54
NINLQ9Y2I6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
NINLQ9Y2I6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.92■■■□□ 2.54
NINLQ9Y2I6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.92■■■□□ 2.54
NINLQ9Y2I6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
NINLQ9Y2I6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NINLQ9Y2I6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 AC008764.7-201ENST00000593779 1081 ntBASIC30.9■■■□□ 2.54
NINLQ9Y2I6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
NINLQ9Y2I6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NINLQ9Y2I6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NINLQ9Y2I6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.89■■■□□ 2.54
NINLQ9Y2I6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
NINLQ9Y2I6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.89■■■□□ 2.53
NINLQ9Y2I6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.88■■■□□ 2.53
NINLQ9Y2I6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
NINLQ9Y2I6 AC133637.1-201ENST00000624115 1537 ntBASIC30.87■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms