Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS3Q9UNS2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 AC022616.5-201ENST00000518796 181 ntBASIC19.99■□□□□ 0.79
COPS3Q9UNS2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS3Q9UNS2 LINC00565-201ENST00000562710 2331 ntBASIC19.98■□□□□ 0.79
COPS3Q9UNS2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 AC120024.1-201ENST00000562672 995 ntBASIC19.98■□□□□ 0.79
COPS3Q9UNS2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.98■□□□□ 0.79
COPS3Q9UNS2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 AC079630.1-202ENST00000618127 1840 ntBASIC19.97■□□□□ 0.79
COPS3Q9UNS2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS3Q9UNS2 AF131216.4-201ENST00000638924 1588 ntBASIC19.96■□□□□ 0.79
COPS3Q9UNS2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS3Q9UNS2 AL024507.2-201ENST00000606070 2574 ntBASIC19.96■□□□□ 0.79
COPS3Q9UNS2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.96■□□□□ 0.79
COPS3Q9UNS2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS3Q9UNS2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS3Q9UNS2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 LINC00526-201ENST00000581067 1875 ntBASIC19.95■□□□□ 0.78
COPS3Q9UNS2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS3Q9UNS2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPS3Q9UNS2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 ABHD17AP5-201ENST00000580133 923 ntBASIC19.93■□□□□ 0.78
COPS3Q9UNS2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 NTF6A-201ENST00000591175 560 ntBASIC19.93■□□□□ 0.78
COPS3Q9UNS2 PVT1_1.1-201ENST00000615125 194 ntBASIC19.93■□□□□ 0.78
COPS3Q9UNS2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COPS3Q9UNS2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.92■□□□□ 0.78
COPS3Q9UNS2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 ECEL1P1-201ENST00000373592 1742 ntBASIC19.91■□□□□ 0.78
COPS3Q9UNS2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms