Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 SMPD5-203ENST00000639008 1464 ntBASIC20.33■□□□□ 0.85
HMG20AQ9NP66 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMG20AQ9NP66 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.33■□□□□ 0.84
HMG20AQ9NP66 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HMG20AQ9NP66 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
HMG20AQ9NP66 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMG20AQ9NP66 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 MIR3960-201ENST00000583311 91 ntBASIC20.32■□□□□ 0.84
HMG20AQ9NP66 AC022413.1-201ENST00000624602 984 ntBASIC20.32■□□□□ 0.84
HMG20AQ9NP66 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HMG20AQ9NP66 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMG20AQ9NP66 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 ECEL1P2-201ENST00000461596 1295 ntBASIC20.3■□□□□ 0.84
HMG20AQ9NP66 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMG20AQ9NP66 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 HLA-L-211ENST00000482052 1765 ntBASIC20.29■□□□□ 0.84
HMG20AQ9NP66 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HMG20AQ9NP66 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.28■□□□□ 0.84
HMG20AQ9NP66 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.28■□□□□ 0.84
HMG20AQ9NP66 MIR4449-201ENST00000578365 66 ntBASIC20.28■□□□□ 0.84
HMG20AQ9NP66 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HMG20AQ9NP66 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.28■□□□□ 0.84
HMG20AQ9NP66 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20AQ9NP66 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20AQ9NP66 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20AQ9NP66 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HMG20AQ9NP66 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMG20AQ9NP66 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HMG20AQ9NP66 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
HMG20AQ9NP66 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20AQ9NP66 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms