Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A1Q9H2H9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A1Q9H2H9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A1Q9H2H9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 BX664725.1-201ENST00000438252 379 ntBASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SLC38A1Q9H2H9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SLC38A1Q9H2H9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 RARRES2P1-201ENST00000474487 481 ntBASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 MIR6722-201ENST00000617286 78 ntBASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 C1orf229-201ENST00000623686 2258 ntBASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms