Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A1Q9H2H9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A1Q9H2H9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC38A1Q9H2H9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 BX664725.1-201ENST00000438252 379 ntBASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC38A1Q9H2H9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC38A1Q9H2H9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SLC38A1Q9H2H9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SLC38A1Q9H2H9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC38A1Q9H2H9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 RARRES2P1-201ENST00000474487 481 ntBASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 MIR6722-201ENST00000617286 78 ntBASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC38A1Q9H2H9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 C1orf229-201ENST00000623686 2258 ntBASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC38A1Q9H2H9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC38A1Q9H2H9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.78■□□□□ 0.92
SLC38A1Q9H2H9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC38A1Q9H2H9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms