Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 pRNA.6-201ENST00000610482 90 ntBASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 pRNA.5-201ENST00000612139 90 ntBASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 pRNA.11-201ENST00000618423 90 ntBASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 pRNA.13-201ENST00000619112 90 ntBASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OPN3Q9H1Y3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 AC008764.7-201ENST00000593779 1081 ntBASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 AC136469.2-201ENST00000623944 1028 ntBASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OPN3Q9H1Y3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 AC141586.4-201ENST00000624558 1573 ntBASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 AC091305.1-201ENST00000479476 895 ntBASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.83■□□□□ 0.77
OPN3Q9H1Y3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
OPN3Q9H1Y3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
OPN3Q9H1Y3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.83■□□□□ 0.76
OPN3Q9H1Y3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
OPN3Q9H1Y3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 AL139125.2-201ENST00000623134 1869 ntBASIC19.82■□□□□ 0.76
OPN3Q9H1Y3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 AC027682.1-201ENST00000562846 899 ntBASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 CA15P2-201ENST00000611168 834 ntBASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 LINC00543-201ENST00000567234 1845 ntBASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
OPN3Q9H1Y3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 RASA4CP-201ENST00000424092 1398 ntBASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
OPN3Q9H1Y3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 AC099791.1-201ENST00000416440 715 ntBASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
OPN3Q9H1Y3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.78■□□□□ 0.76
OPN3Q9H1Y3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms