Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 AC011551.1-201ENST00000614101 683 ntBASIC23.43■■□□□ 1.34
DDX47Q9H0S4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 AC079630.1-202ENST00000618127 1840 ntBASIC23.42■■□□□ 1.34
DDX47Q9H0S4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.34
DDX47Q9H0S4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
DDX47Q9H0S4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 AC242852.2-201ENST00000615738 1807 ntBASIC23.39■■□□□ 1.33
DDX47Q9H0S4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 AC137767.1-201ENST00000602918 1920 ntBASIC23.39■■□□□ 1.33
DDX47Q9H0S4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 AC007375.3-201ENST00000600936 2314 ntBASIC23.38■■□□□ 1.33
DDX47Q9H0S4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 AC129492.7-201ENST00000622992 756 ntBASIC23.37■■□□□ 1.33
DDX47Q9H0S4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 U85056.1-201ENST00000616429 682 ntBASIC23.36■■□□□ 1.33
DDX47Q9H0S4 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ESRRAP2-201ENST00000418437 1549 ntBASIC23.35■■□□□ 1.33
DDX47Q9H0S4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms