Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.44■■□□□ 1.34
DDX47Q9H0S4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 AC011551.1-201ENST00000614101 683 ntBASIC23.43■■□□□ 1.34
DDX47Q9H0S4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
DDX47Q9H0S4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 AC079630.1-202ENST00000618127 1840 ntBASIC23.42■■□□□ 1.34
DDX47Q9H0S4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
DDX47Q9H0S4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
DDX47Q9H0S4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX47Q9H0S4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.34
DDX47Q9H0S4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
DDX47Q9H0S4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 AC242852.2-201ENST00000615738 1807 ntBASIC23.39■■□□□ 1.33
DDX47Q9H0S4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 AC137767.1-201ENST00000602918 1920 ntBASIC23.39■■□□□ 1.33
DDX47Q9H0S4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
DDX47Q9H0S4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 AC007375.3-201ENST00000600936 2314 ntBASIC23.38■■□□□ 1.33
DDX47Q9H0S4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX47Q9H0S4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 AC129492.7-201ENST00000622992 756 ntBASIC23.37■■□□□ 1.33
DDX47Q9H0S4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX47Q9H0S4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 U85056.1-201ENST00000616429 682 ntBASIC23.36■■□□□ 1.33
DDX47Q9H0S4 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX47Q9H0S4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ESRRAP2-201ENST00000418437 1549 ntBASIC23.35■■□□□ 1.33
DDX47Q9H0S4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX47Q9H0S4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms