Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF5Q99942 AC079630.1-202ENST00000618127 1840 ntBASIC18■□□□□ 0.47
RNF5Q99942 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RNF5Q99942 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF5Q99942 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF5Q99942 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF5Q99942 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF5Q99942 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF5Q99942 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF5Q99942 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF5Q99942 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF5Q99942 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RNF5Q99942 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
RNF5Q99942 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RNF5Q99942 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF5Q99942 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF5Q99942 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF5Q99942 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF5Q99942 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF5Q99942 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RNF5Q99942 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
RNF5Q99942 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF5Q99942 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF5Q99942 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF5Q99942 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF5Q99942 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF5Q99942 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF5Q99942 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF5Q99942 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.97■□□□□ 0.47
RNF5Q99942 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RNF5Q99942 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF5Q99942 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF5Q99942 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF5Q99942 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF5Q99942 AC012676.1-201ENST00000574705 1949 ntBASIC17.96■□□□□ 0.47
RNF5Q99942 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF5Q99942 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
RNF5Q99942 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
RNF5Q99942 UNC93B8-201ENST00000511903 705 ntBASIC17.96■□□□□ 0.47
RNF5Q99942 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RNF5Q99942 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF5Q99942 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RNF5Q99942 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF5Q99942 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF5Q99942 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF5Q99942 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
RNF5Q99942 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
RNF5Q99942 GUSBP5-201ENST00000418136 578 ntBASIC17.95■□□□□ 0.46
RNF5Q99942 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.95■□□□□ 0.46
RNF5Q99942 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF5Q99942 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF5Q99942 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.95■□□□□ 0.46
RNF5Q99942 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
RNF5Q99942 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF5Q99942 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF5Q99942 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF5Q99942 LINC01529-204ENST00000636474 1715 ntBASIC17.95■□□□□ 0.46
RNF5Q99942 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF5Q99942 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF5Q99942 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
RNF5Q99942 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF5Q99942 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 KRT16P3-201ENST00000439127 1283 ntBASIC17.94■□□□□ 0.46
RNF5Q99942 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF5Q99942 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF5Q99942 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF5Q99942 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF5Q99942 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF5Q99942 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF5Q99942 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RNF5Q99942 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF5Q99942 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF5Q99942 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 AL353803.4-201ENST00000565882 1934 ntBASIC17.93■□□□□ 0.46
RNF5Q99942 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF5Q99942 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF5Q99942 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF5Q99942 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF5Q99942 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNF5Q99942 AC009102.2-201ENST00000606772 1639 ntBASIC17.92■□□□□ 0.46
RNF5Q99942 DUX4L4-201ENST00000566884 1269 ntBASIC17.92■□□□□ 0.46
RNF5Q99942 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF5Q99942 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF5Q99942 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms