Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB18PQ96TA0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHB18PQ96TA0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
PCDHB18PQ96TA0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 AL451085.2-201ENST00000605085 799 ntBASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 MIR6722-201ENST00000617286 78 ntBASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
PCDHB18PQ96TA0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 AC092028.1-203ENST00000608262 953 ntBASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB18PQ96TA0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB18PQ96TA0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB18PQ96TA0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
PCDHB18PQ96TA0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB18PQ96TA0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHB18PQ96TA0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 AC009299.2-201ENST00000482477 511 ntBASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 C1orf229-201ENST00000623686 2258 ntBASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHB18PQ96TA0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 Z92544.1-202ENST00000571933 1220 ntBASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHB18PQ96TA0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 AC239859.2-201ENST00000444165 318 ntBASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
PCDHB18PQ96TA0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.89■■□□□ 1.42
PCDHB18PQ96TA0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB18PQ96TA0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB18PQ96TA0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB18PQ96TA0 MIR4787-201ENST00000607364 84 ntBASIC23.89■■□□□ 1.41
PCDHB18PQ96TA0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB18PQ96TA0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB18PQ96TA0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 AL353803.4-201ENST00000565882 1934 ntBASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHB18PQ96TA0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 KRT125P-201ENST00000546827 989 ntBASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB18PQ96TA0 AC005703.6-201ENST00000623265 1329 ntBASIC23.85■■□□□ 1.41
PCDHB18PQ96TA0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB18PQ96TA0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB18PQ96TA0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms