Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLCC1Q96S66 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCC1Q96S66 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLCC1Q96S66 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLCC1Q96S66 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.76■□□□□ 0.59
CLCC1Q96S66 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCC1Q96S66 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCC1Q96S66 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLCC1Q96S66 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CLCC1Q96S66 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCC1Q96S66 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCC1Q96S66 ATP5G2P3-201ENST00000429083 425 ntBASIC18.75■□□□□ 0.59
CLCC1Q96S66 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
CLCC1Q96S66 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCC1Q96S66 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLCC1Q96S66 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.75■□□□□ 0.59
CLCC1Q96S66 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.75■□□□□ 0.59
CLCC1Q96S66 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLCC1Q96S66 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCC1Q96S66 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCC1Q96S66 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCC1Q96S66 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCC1Q96S66 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CLCC1Q96S66 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCC1Q96S66 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCC1Q96S66 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCC1Q96S66 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLCC1Q96S66 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CLCC1Q96S66 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCC1Q96S66 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCC1Q96S66 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCC1Q96S66 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCC1Q96S66 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCC1Q96S66 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCC1Q96S66 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCC1Q96S66 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCC1Q96S66 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCC1Q96S66 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCC1Q96S66 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCC1Q96S66 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLCC1Q96S66 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCC1Q96S66 AC004812.2-201ENST00000611079 2094 ntBASIC18.71■□□□□ 0.59
CLCC1Q96S66 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCC1Q96S66 AL033527.3-201ENST00000566366 1196 ntBASIC18.71■□□□□ 0.59
CLCC1Q96S66 AC012354.3-201ENST00000623734 483 ntBASIC18.71■□□□□ 0.59
CLCC1Q96S66 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCC1Q96S66 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCC1Q96S66 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLCC1Q96S66 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCC1Q96S66 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCC1Q96S66 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCC1Q96S66 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLCC1Q96S66 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 TSPY13P-201ENST00000338964 914 ntBASIC18.7■□□□□ 0.58
CLCC1Q96S66 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLCC1Q96S66 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCC1Q96S66 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCC1Q96S66 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCC1Q96S66 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CLCC1Q96S66 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCC1Q96S66 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCC1Q96S66 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCC1Q96S66 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
CLCC1Q96S66 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLCC1Q96S66 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCC1Q96S66 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms