Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN4Q96NZ1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FOXN4Q96NZ1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXN4Q96NZ1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
FOXN4Q96NZ1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.08■□□□□ 0.8
FOXN4Q96NZ1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXN4Q96NZ1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXN4Q96NZ1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXN4Q96NZ1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
FOXN4Q96NZ1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 KRT125P-201ENST00000546827 989 ntBASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXN4Q96NZ1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 BX664725.1-201ENST00000438252 379 ntBASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 AC092068.2-201ENST00000590491 1708 ntBASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXN4Q96NZ1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 AC012676.1-201ENST00000574705 1949 ntBASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXN4Q96NZ1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 MIR4787-201ENST00000607364 84 ntBASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FOXN4Q96NZ1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 SNX5-217ENST00000606557 1087 ntBASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FOXN4Q96NZ1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN4Q96NZ1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN4Q96NZ1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN4Q96NZ1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXN4Q96NZ1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.02■□□□□ 0.8
FOXN4Q96NZ1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FOXN4Q96NZ1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.02■□□□□ 0.8
FOXN4Q96NZ1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms