Protein–RNA interactions for Protein: Q96NR8

RDH12, Retinol dehydrogenase 12, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12Q96NR8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 ECEL1P2-201ENST00000461596 1295 ntBASIC20.7■□□□□ 0.9
RDH12Q96NR8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
RDH12Q96NR8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
RDH12Q96NR8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.7■□□□□ 0.9
RDH12Q96NR8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.7■□□□□ 0.9
RDH12Q96NR8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RDH12Q96NR8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RDH12Q96NR8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.69■□□□□ 0.9
RDH12Q96NR8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.69■□□□□ 0.9
RDH12Q96NR8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.69■□□□□ 0.9
RDH12Q96NR8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.69■□□□□ 0.9
RDH12Q96NR8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RDH12Q96NR8 ALDH1A3-203ENST00000557963 1670 ntBASIC20.69■□□□□ 0.9
RDH12Q96NR8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH12Q96NR8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
RDH12Q96NR8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RDH12Q96NR8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RDH12Q96NR8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RDH12Q96NR8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RDH12Q96NR8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RDH12Q96NR8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RDH12Q96NR8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.67■□□□□ 0.9
RDH12Q96NR8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RDH12Q96NR8 FBXW4P1-201ENST00000426721 2239 ntBASIC20.67■□□□□ 0.9
RDH12Q96NR8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RDH12Q96NR8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RDH12Q96NR8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.66■□□□□ 0.9
RDH12Q96NR8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RDH12Q96NR8 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.66■□□□□ 0.9
RDH12Q96NR8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RDH12Q96NR8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RDH12Q96NR8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.65■□□□□ 0.9
RDH12Q96NR8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RDH12Q96NR8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.65■□□□□ 0.9
RDH12Q96NR8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.65■□□□□ 0.9
RDH12Q96NR8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RDH12Q96NR8 PKD1P6-201ENST00000343738 4769 ntBASIC20.65■□□□□ 0.9
RDH12Q96NR8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RDH12Q96NR8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RDH12Q96NR8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
RDH12Q96NR8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.64■□□□□ 0.89
RDH12Q96NR8 RAP2CP1-202ENST00000605179 643 ntBASIC20.64■□□□□ 0.89
RDH12Q96NR8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RDH12Q96NR8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RDH12Q96NR8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RDH12Q96NR8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RDH12Q96NR8 ZNRF2P2-203ENST00000454624 420 ntBASIC20.63■□□□□ 0.89
RDH12Q96NR8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.63■□□□□ 0.89
RDH12Q96NR8 AC026202.3-201ENST00000600805 1127 ntBASIC20.63■□□□□ 0.89
RDH12Q96NR8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH12Q96NR8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH12Q96NR8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RDH12Q96NR8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RDH12Q96NR8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH12Q96NR8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH12Q96NR8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.62■□□□□ 0.89
RDH12Q96NR8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH12Q96NR8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RDH12Q96NR8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RDH12Q96NR8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH12Q96NR8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RDH12Q96NR8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RDH12Q96NR8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms