Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.56■■□□□ 1.36
RNF25Q96BH1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF25Q96BH1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF25Q96BH1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF25Q96BH1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF25Q96BH1 AC233723.2-201ENST00000623798 2106 ntBASIC23.56■■□□□ 1.36
RNF25Q96BH1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
RNF25Q96BH1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RNF25Q96BH1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RNF25Q96BH1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.54■■□□□ 1.36
RNF25Q96BH1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
RNF25Q96BH1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
RNF25Q96BH1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF25Q96BH1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RNF25Q96BH1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RNF25Q96BH1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF25Q96BH1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RNF25Q96BH1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.53■■□□□ 1.36
RNF25Q96BH1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RNF25Q96BH1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.53■■□□□ 1.36
RNF25Q96BH1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
RNF25Q96BH1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RNF25Q96BH1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
RNF25Q96BH1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.52■■□□□ 1.36
RNF25Q96BH1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF25Q96BH1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.52■■□□□ 1.36
RNF25Q96BH1 AL031848.2-201ENST00000607670 837 ntBASIC23.52■■□□□ 1.36
RNF25Q96BH1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RNF25Q96BH1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.52■■□□□ 1.36
RNF25Q96BH1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RNF25Q96BH1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF25Q96BH1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.51■■□□□ 1.35
RNF25Q96BH1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF25Q96BH1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.51■■□□□ 1.35
RNF25Q96BH1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RNF25Q96BH1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.51■■□□□ 1.35
RNF25Q96BH1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF25Q96BH1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF25Q96BH1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF25Q96BH1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
RNF25Q96BH1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF25Q96BH1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF25Q96BH1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.5■■□□□ 1.35
RNF25Q96BH1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.5■■□□□ 1.35
RNF25Q96BH1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
RNF25Q96BH1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF25Q96BH1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RNF25Q96BH1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF25Q96BH1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RNF25Q96BH1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF25Q96BH1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF25Q96BH1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF25Q96BH1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.49■■□□□ 1.35
RNF25Q96BH1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.49■■□□□ 1.35
RNF25Q96BH1 SNX5-217ENST00000606557 1087 ntBASIC23.49■■□□□ 1.35
RNF25Q96BH1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF25Q96BH1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.49■■□□□ 1.35
RNF25Q96BH1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RNF25Q96BH1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RNF25Q96BH1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.48■■□□□ 1.35
RNF25Q96BH1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF25Q96BH1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF25Q96BH1 AC079630.1-202ENST00000618127 1840 ntBASIC23.48■■□□□ 1.35
RNF25Q96BH1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF25Q96BH1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF25Q96BH1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.48■■□□□ 1.35
RNF25Q96BH1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.48■■□□□ 1.35
RNF25Q96BH1 AC137630.3-201ENST00000607245 391 ntBASIC23.48■■□□□ 1.35
RNF25Q96BH1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms