Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.7■□□□□ 0.9
CNOT9Q92600 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 AC239859.2-201ENST00000444165 318 ntBASIC20.7■□□□□ 0.9
CNOT9Q92600 MIR6722-201ENST00000617286 78 ntBASIC20.7■□□□□ 0.9
CNOT9Q92600 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CNOT9Q92600 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT9Q92600 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.7■□□□□ 0.9
CNOT9Q92600 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT9Q92600 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT9Q92600 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT9Q92600 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT9Q92600 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.69■□□□□ 0.9
CNOT9Q92600 MIR4787-201ENST00000607364 84 ntBASIC20.69■□□□□ 0.9
CNOT9Q92600 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT9Q92600 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.69■□□□□ 0.9
CNOT9Q92600 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT9Q92600 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CNOT9Q92600 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT9Q92600 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT9Q92600 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT9Q92600 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT9Q92600 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CNOT9Q92600 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT9Q92600 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CNOT9Q92600 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT9Q92600 AC079630.1-202ENST00000618127 1840 ntBASIC20.68■□□□□ 0.9
CNOT9Q92600 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CNOT9Q92600 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT9Q92600 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CNOT9Q92600 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CNOT9Q92600 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT9Q92600 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CNOT9Q92600 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT9Q92600 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CNOT9Q92600 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CNOT9Q92600 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT9Q92600 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT9Q92600 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT9Q92600 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT9Q92600 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT9Q92600 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT9Q92600 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT9Q92600 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT9Q92600 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT9Q92600 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT9Q92600 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT9Q92600 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT9Q92600 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT9Q92600 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT9Q92600 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT9Q92600 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT9Q92600 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT9Q92600 AC005703.6-201ENST00000623265 1329 ntBASIC20.65■□□□□ 0.9
CNOT9Q92600 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT9Q92600 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT9Q92600 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT9Q92600 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CNOT9Q92600 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT9Q92600 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CNOT9Q92600 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CNOT9Q92600 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CNOT9Q92600 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT9Q92600 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT9Q92600 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT9Q92600 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT9Q92600 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT9Q92600 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT9Q92600 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CNOT9Q92600 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT9Q92600 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNOT9Q92600 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.63■□□□□ 0.89
CNOT9Q92600 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CNOT9Q92600 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CNOT9Q92600 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.63■□□□□ 0.89
CNOT9Q92600 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CNOT9Q92600 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT9Q92600 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms