Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.68■■□□□ 1.54
TMEM40Q8WWA1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
TMEM40Q8WWA1 MIR6821-201ENST00000617625 74 ntBASIC24.68■■□□□ 1.54
TMEM40Q8WWA1 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.68■■□□□ 1.54
TMEM40Q8WWA1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 IRS3P-201ENST00000223076 1006 ntBASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 MIR5787-201ENST00000611784 55 ntBASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TMEM40Q8WWA1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 AC097381.1-201ENST00000429019 1296 ntBASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMEM40Q8WWA1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.65■■□□□ 1.54
TMEM40Q8WWA1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM40Q8WWA1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM40Q8WWA1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.65■■□□□ 1.54
TMEM40Q8WWA1 AC087623.3-201ENST00000607047 1098 ntBASIC24.65■■□□□ 1.54
TMEM40Q8WWA1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMEM40Q8WWA1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.64■■□□□ 1.54
TMEM40Q8WWA1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM40Q8WWA1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.64■■□□□ 1.54
TMEM40Q8WWA1 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.64■■□□□ 1.54
TMEM40Q8WWA1 SLC47A1P1-202ENST00000449666 945 ntBASIC24.64■■□□□ 1.54
TMEM40Q8WWA1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMEM40Q8WWA1 AC092666.2-201ENST00000613287 246 ntBASIC24.64■■□□□ 1.54
TMEM40Q8WWA1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.64■■□□□ 1.53
TMEM40Q8WWA1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TMEM40Q8WWA1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM40Q8WWA1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM40Q8WWA1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM40Q8WWA1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM40Q8WWA1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.63■■□□□ 1.53
TMEM40Q8WWA1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM40Q8WWA1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMEM40Q8WWA1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMEM40Q8WWA1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TMEM40Q8WWA1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
TMEM40Q8WWA1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 AL499627.2-201ENST00000606283 725 ntBASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 AC133637.1-201ENST00000624115 1537 ntBASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.59■■□□□ 1.53
TMEM40Q8WWA1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 AC126544.1-201ENST00000580842 1059 ntBASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TMEM40Q8WWA1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.58■■□□□ 1.52
TMEM40Q8WWA1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms