Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
STAG1Q8WVM7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.61■■□□□ 1.85
STAG1Q8WVM7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
STAG1Q8WVM7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
STAG1Q8WVM7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.59■■□□□ 1.85
STAG1Q8WVM7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
STAG1Q8WVM7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.59■■□□□ 1.85
STAG1Q8WVM7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
STAG1Q8WVM7 AC079630.1-202ENST00000618127 1840 ntBASIC26.58■■□□□ 1.85
STAG1Q8WVM7 AC144652.1-201ENST00000609974 1624 ntBASIC26.58■■□□□ 1.85
STAG1Q8WVM7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.58■■□□□ 1.85
STAG1Q8WVM7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
STAG1Q8WVM7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.57■■□□□ 1.84
STAG1Q8WVM7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
STAG1Q8WVM7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
STAG1Q8WVM7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
STAG1Q8WVM7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
STAG1Q8WVM7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
STAG1Q8WVM7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
STAG1Q8WVM7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
STAG1Q8WVM7 AC099791.2-201ENST00000605725 427 ntBASIC26.56■■□□□ 1.84
STAG1Q8WVM7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
STAG1Q8WVM7 AC241377.3-202ENST00000626088 1088 ntBASIC26.56■■□□□ 1.84
STAG1Q8WVM7 AC241585.3-202ENST00000628937 1088 ntBASIC26.56■■□□□ 1.84
STAG1Q8WVM7 AC245100.8-202ENST00000629247 1058 ntBASIC26.56■■□□□ 1.84
STAG1Q8WVM7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
STAG1Q8WVM7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.56■■□□□ 1.84
STAG1Q8WVM7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
STAG1Q8WVM7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 ANOS2P-203ENST00000472227 1816 ntBASIC26.55■■□□□ 1.84
STAG1Q8WVM7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
STAG1Q8WVM7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
STAG1Q8WVM7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
STAG1Q8WVM7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.54■■□□□ 1.84
STAG1Q8WVM7 FP325331.1-202ENST00000623531 1380 ntBASIC26.54■■□□□ 1.84
STAG1Q8WVM7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
STAG1Q8WVM7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
STAG1Q8WVM7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.53■■□□□ 1.84
STAG1Q8WVM7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
STAG1Q8WVM7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.53■■□□□ 1.84
STAG1Q8WVM7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
STAG1Q8WVM7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
STAG1Q8WVM7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
STAG1Q8WVM7 AC006455.2-201ENST00000429931 906 ntBASIC26.52■■□□□ 1.84
STAG1Q8WVM7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
STAG1Q8WVM7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
STAG1Q8WVM7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
STAG1Q8WVM7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.52■■□□□ 1.84
STAG1Q8WVM7 AC092068.2-201ENST00000590491 1708 ntBASIC26.52■■□□□ 1.84
STAG1Q8WVM7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
STAG1Q8WVM7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 AC133561.4-201ENST00000566112 224 ntBASIC26.51■■□□□ 1.83
STAG1Q8WVM7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.51■■□□□ 1.83
STAG1Q8WVM7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
STAG1Q8WVM7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
STAG1Q8WVM7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
STAG1Q8WVM7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.5■■□□□ 1.83
STAG1Q8WVM7 UNC93B3-201ENST00000308076 687 ntBASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms