Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 BX664725.1-201ENST00000438252 379 ntBASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 MIR6722-201ENST00000617286 78 ntBASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.58■□□□□ 0.89
LSMEM1Q8N8F7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LSMEM1Q8N8F7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.57■□□□□ 0.88
LSMEM1Q8N8F7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
LSMEM1Q8N8F7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 AC079630.1-202ENST00000618127 1840 ntBASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LSMEM1Q8N8F7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 Z92544.1-202ENST00000571933 1220 ntBASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LSMEM1Q8N8F7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LSMEM1Q8N8F7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LSMEM1Q8N8F7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.52■□□□□ 0.87
LSMEM1Q8N8F7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
LSMEM1Q8N8F7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSMEM1Q8N8F7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSMEM1Q8N8F7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.51■□□□□ 0.87
LSMEM1Q8N8F7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LSMEM1Q8N8F7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.51■□□□□ 0.87
LSMEM1Q8N8F7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LSMEM1Q8N8F7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.51■□□□□ 0.87
LSMEM1Q8N8F7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms