Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 AC233992.3-201ENST00000607491 485 ntBASIC22.93■■□□□ 1.26
CHPFQ8IZ52 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHPFQ8IZ52 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 pRNA.6-201ENST00000610482 90 ntBASIC22.92■■□□□ 1.26
CHPFQ8IZ52 pRNA.5-201ENST00000612139 90 ntBASIC22.92■■□□□ 1.26
CHPFQ8IZ52 pRNA.11-201ENST00000618423 90 ntBASIC22.92■■□□□ 1.26
CHPFQ8IZ52 pRNA.13-201ENST00000619112 90 ntBASIC22.92■■□□□ 1.26
CHPFQ8IZ52 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHPFQ8IZ52 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHPFQ8IZ52 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.91■■□□□ 1.26
CHPFQ8IZ52 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHPFQ8IZ52 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CHPFQ8IZ52 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CHPFQ8IZ52 IRS3P-201ENST00000223076 1006 ntBASIC22.91■■□□□ 1.26
CHPFQ8IZ52 BX842568.3-201ENST00000418104 571 ntBASIC22.91■■□□□ 1.26
CHPFQ8IZ52 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHPFQ8IZ52 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.91■■□□□ 1.26
CHPFQ8IZ52 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHPFQ8IZ52 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHPFQ8IZ52 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHPFQ8IZ52 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHPFQ8IZ52 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.9■■□□□ 1.26
CHPFQ8IZ52 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHPFQ8IZ52 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHPFQ8IZ52 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHPFQ8IZ52 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHPFQ8IZ52 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 MIR6821-201ENST00000617625 74 ntBASIC22.89■■□□□ 1.25
CHPFQ8IZ52 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHPFQ8IZ52 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.88■■□□□ 1.25
CHPFQ8IZ52 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHPFQ8IZ52 AC141586.4-201ENST00000624558 1573 ntBASIC22.88■■□□□ 1.25
CHPFQ8IZ52 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 AC097381.1-201ENST00000429019 1296 ntBASIC22.87■■□□□ 1.25
CHPFQ8IZ52 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 AC104564.3-201ENST00000582367 638 ntBASIC22.87■■□□□ 1.25
CHPFQ8IZ52 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CHPFQ8IZ52 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.87■■□□□ 1.25
CHPFQ8IZ52 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHPFQ8IZ52 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHPFQ8IZ52 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHPFQ8IZ52 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.85■■□□□ 1.25
CHPFQ8IZ52 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.85■■□□□ 1.25
CHPFQ8IZ52 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHPFQ8IZ52 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.85■■□□□ 1.25
CHPFQ8IZ52 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHPFQ8IZ52 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHPFQ8IZ52 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CHPFQ8IZ52 AC126544.1-201ENST00000580842 1059 ntBASIC22.84■■□□□ 1.25
CHPFQ8IZ52 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.84■■□□□ 1.25
CHPFQ8IZ52 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHPFQ8IZ52 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.84■■□□□ 1.25
CHPFQ8IZ52 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHPFQ8IZ52 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.84■■□□□ 1.25
CHPFQ8IZ52 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
CHPFQ8IZ52 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms