Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CPNE9Q8IYJ1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.23■■□□□ 1.15
CPNE9Q8IYJ1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CPNE9Q8IYJ1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPNE9Q8IYJ1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.23■■□□□ 1.15
CPNE9Q8IYJ1 MIR6722-201ENST00000617286 78 ntBASIC22.23■■□□□ 1.15
CPNE9Q8IYJ1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CPNE9Q8IYJ1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CPNE9Q8IYJ1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
CPNE9Q8IYJ1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 DUSP8P3-201ENST00000399571 1760 ntBASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 AC079630.1-202ENST00000618127 1840 ntBASIC22.2■■□□□ 1.14
CPNE9Q8IYJ1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CPNE9Q8IYJ1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CPNE9Q8IYJ1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPNE9Q8IYJ1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CPNE9Q8IYJ1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPNE9Q8IYJ1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.19■■□□□ 1.14
CPNE9Q8IYJ1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
CPNE9Q8IYJ1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 AC005703.6-201ENST00000623265 1329 ntBASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 TSPY9P-201ENST00000440215 945 ntBASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 TSPY11P-201ENST00000442607 1045 ntBASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 MTDHP2-201ENST00000601468 714 ntBASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE9Q8IYJ1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CPNE9Q8IYJ1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE9Q8IYJ1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CPNE9Q8IYJ1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE9Q8IYJ1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE9Q8IYJ1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE9Q8IYJ1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE9Q8IYJ1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CPNE9Q8IYJ1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.15■■□□□ 1.14
CPNE9Q8IYJ1 AL035685.1-201ENST00000636663 812 ntBASIC22.15■■□□□ 1.14
CPNE9Q8IYJ1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPNE9Q8IYJ1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CPNE9Q8IYJ1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPNE9Q8IYJ1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CPNE9Q8IYJ1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.14■■□□□ 1.14
CPNE9Q8IYJ1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CPNE9Q8IYJ1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CPNE9Q8IYJ1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.14■■□□□ 1.13
CPNE9Q8IYJ1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.14■■□□□ 1.13
CPNE9Q8IYJ1 AC010997.5-201ENST00000609182 354 ntBASIC22.14■■□□□ 1.13
CPNE9Q8IYJ1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPNE9Q8IYJ1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
CPNE9Q8IYJ1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms