Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC28■■■□□ 2.07
SMC5Q8IY18 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SMC5Q8IY18 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28■■■□□ 2.07
SMC5Q8IY18 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SMC5Q8IY18 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28■■■□□ 2.07
SMC5Q8IY18 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28■■■□□ 2.07
SMC5Q8IY18 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28■■■□□ 2.07
SMC5Q8IY18 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28■■■□□ 2.07
SMC5Q8IY18 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
SMC5Q8IY18 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
SMC5Q8IY18 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SMC5Q8IY18 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
SMC5Q8IY18 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SMC5Q8IY18 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
SMC5Q8IY18 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
SMC5Q8IY18 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.99■■■□□ 2.07
SMC5Q8IY18 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
SMC5Q8IY18 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
SMC5Q8IY18 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMC5Q8IY18 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMC5Q8IY18 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMC5Q8IY18 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.98■■■□□ 2.07
SMC5Q8IY18 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMC5Q8IY18 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.98■■■□□ 2.07
SMC5Q8IY18 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.98■■■□□ 2.07
SMC5Q8IY18 MIR6722-201ENST00000617286 78 ntBASIC27.98■■■□□ 2.07
SMC5Q8IY18 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.98■■■□□ 2.07
SMC5Q8IY18 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMC5Q8IY18 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
SMC5Q8IY18 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SMC5Q8IY18 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SMC5Q8IY18 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.97■■■□□ 2.07
SMC5Q8IY18 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMC5Q8IY18 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SMC5Q8IY18 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMC5Q8IY18 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMC5Q8IY18 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.96■■■□□ 2.07
SMC5Q8IY18 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.96■■■□□ 2.07
SMC5Q8IY18 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.96■■■□□ 2.07
SMC5Q8IY18 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMC5Q8IY18 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SMC5Q8IY18 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
SMC5Q8IY18 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.95■■■□□ 2.07
SMC5Q8IY18 AC233723.2-201ENST00000623798 2106 ntBASIC27.95■■■□□ 2.07
SMC5Q8IY18 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SMC5Q8IY18 AC079834.2-201ENST00000609776 1949 ntBASIC27.95■■■□□ 2.06
SMC5Q8IY18 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
SMC5Q8IY18 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
SMC5Q8IY18 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.95■■■□□ 2.06
SMC5Q8IY18 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
SMC5Q8IY18 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.94■■■□□ 2.06
SMC5Q8IY18 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
SMC5Q8IY18 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
SMC5Q8IY18 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.94■■■□□ 2.06
SMC5Q8IY18 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.94■■■□□ 2.06
SMC5Q8IY18 AL353803.4-201ENST00000565882 1934 ntBASIC27.94■■■□□ 2.06
SMC5Q8IY18 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SMC5Q8IY18 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SMC5Q8IY18 AL117328.2-201ENST00000624617 1940 ntBASIC27.93■■■□□ 2.06
SMC5Q8IY18 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SMC5Q8IY18 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.93■■■□□ 2.06
SMC5Q8IY18 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.93■■■□□ 2.06
SMC5Q8IY18 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SMC5Q8IY18 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.92■■■□□ 2.06
SMC5Q8IY18 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
SMC5Q8IY18 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
SMC5Q8IY18 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
SMC5Q8IY18 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
SMC5Q8IY18 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SMC5Q8IY18 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SMC5Q8IY18 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.91■■■□□ 2.06
SMC5Q8IY18 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SMC5Q8IY18 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
SMC5Q8IY18 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
SMC5Q8IY18 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.91■■■□□ 2.06
SMC5Q8IY18 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.91■■■□□ 2.06
SMC5Q8IY18 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SMC5Q8IY18 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
SMC5Q8IY18 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.9■■■□□ 2.06
SMC5Q8IY18 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.9■■■□□ 2.06
SMC5Q8IY18 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
SMC5Q8IY18 BX664725.1-201ENST00000438252 379 ntBASIC27.9■■■□□ 2.06
SMC5Q8IY18 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
SMC5Q8IY18 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
SMC5Q8IY18 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
SMC5Q8IY18 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
SMC5Q8IY18 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.05
SMC5Q8IY18 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.89■■■□□ 2.05
SMC5Q8IY18 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SMC5Q8IY18 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.88■■■□□ 2.05
SMC5Q8IY18 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.88■■■□□ 2.05
SMC5Q8IY18 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SMC5Q8IY18 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.88■■■□□ 2.05
SMC5Q8IY18 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
SMC5Q8IY18 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.88■■■□□ 2.05
SMC5Q8IY18 AC144652.1-201ENST00000609974 1624 ntBASIC27.88■■■□□ 2.05
SMC5Q8IY18 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
SMC5Q8IY18 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
SMC5Q8IY18 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.87■■■□□ 2.05
SMC5Q8IY18 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms