Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCN4BQ8IWT1 EDA-201ENST00000338901 1233 ntBASIC23.75■■□□□ 1.39
SCN4BQ8IWT1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.75■■□□□ 1.39
SCN4BQ8IWT1 AL355001.2-201ENST00000620617 1191 ntBASIC23.75■■□□□ 1.39
SCN4BQ8IWT1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.75■■□□□ 1.39
SCN4BQ8IWT1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCN4BQ8IWT1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCN4BQ8IWT1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 ABCB10P4-201ENST00000566803 2184 ntBASIC23.74■■□□□ 1.39
SCN4BQ8IWT1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 MIR3181-201ENST00000578512 73 ntBASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 AL138724.1-201ENST00000606771 1088 ntBASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 pRNA.6-201ENST00000610482 90 ntBASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 pRNA.5-201ENST00000612139 90 ntBASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 pRNA.11-201ENST00000618423 90 ntBASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 pRNA.13-201ENST00000619112 90 ntBASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
SCN4BQ8IWT1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 SUDS3P1-201ENST00000505831 966 ntBASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 AC011298.3-201ENST00000615796 283 ntBASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.72■■□□□ 1.39
SCN4BQ8IWT1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 AF213884.3-201ENST00000563833 479 ntBASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
SCN4BQ8IWT1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCN4BQ8IWT1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCN4BQ8IWT1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
SCN4BQ8IWT1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCN4BQ8IWT1 MIR935-201ENST00000401179 91 ntBASIC23.7■■□□□ 1.38
SCN4BQ8IWT1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCN4BQ8IWT1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SCN4BQ8IWT1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SCN4BQ8IWT1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCN4BQ8IWT1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.69■■□□□ 1.38
SCN4BQ8IWT1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.69■■□□□ 1.38
SCN4BQ8IWT1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCN4BQ8IWT1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 AP001330.3-201ENST00000520123 633 ntBASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
SCN4BQ8IWT1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 AC136469.2-201ENST00000623944 1028 ntBASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 AL136967.2-201ENST00000623968 743 ntBASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SCN4BQ8IWT1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCN4BQ8IWT1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms