Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC009086.3-201ENST00000623486 1008 ntBASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 SYT6-210ENST00000641643 1587 ntBASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRTM4Q86VH4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRTM4Q86VH4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
LRRTM4Q86VH4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.08■■□□□ 1.12
LRRTM4Q86VH4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LRRTM4Q86VH4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LRRTM4Q86VH4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LRRTM4Q86VH4 AC093323.1-202ENST00000635031 2045 ntBASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 AC144652.1-201ENST00000609974 1624 ntBASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 AL136162.1-201ENST00000607711 1078 ntBASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRTM4Q86VH4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 AC006455.2-201ENST00000429931 906 ntBASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 FP325331.1-202ENST00000623531 1380 ntBASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
LRRTM4Q86VH4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 PBX2P1-201ENST00000493219 1291 ntBASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 AC135279.3-201ENST00000610945 1311 ntBASIC22.05■■□□□ 1.12
LRRTM4Q86VH4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 SERBP1P1-201ENST00000396021 1160 ntBASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 AC106739.1-201ENST00000617035 715 ntBASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LRRTM4Q86VH4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 AL138724.1-201ENST00000606771 1088 ntBASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
LRRTM4Q86VH4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
LRRTM4Q86VH4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRRTM4Q86VH4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.02■■□□□ 1.12
LRRTM4Q86VH4 AC079630.1-202ENST00000618127 1840 ntBASIC22.02■■□□□ 1.12
LRRTM4Q86VH4 AC024257.2-201ENST00000549699 147 ntBASIC22.02■■□□□ 1.12
LRRTM4Q86VH4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LRRTM4Q86VH4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms