Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC008687.6-201ENST00000596318 630 ntBASIC19.28■□□□□ 0.68
CSMD2Q7Z408 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.27■□□□□ 0.68
CSMD2Q7Z408 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.27■□□□□ 0.68
CSMD2Q7Z408 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSMD2Q7Z408 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CSMD2Q7Z408 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
CSMD2Q7Z408 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CSMD2Q7Z408 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSMD2Q7Z408 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.27■□□□□ 0.67
CSMD2Q7Z408 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSMD2Q7Z408 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CSMD2Q7Z408 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSMD2Q7Z408 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.26■□□□□ 0.67
CSMD2Q7Z408 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSMD2Q7Z408 AC006970.2-201ENST00000450065 779 ntBASIC19.26■□□□□ 0.67
CSMD2Q7Z408 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.26■□□□□ 0.67
CSMD2Q7Z408 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.25■□□□□ 0.67
CSMD2Q7Z408 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.24■□□□□ 0.67
CSMD2Q7Z408 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 AC137761.2-201ENST00000561729 223 ntBASIC19.23■□□□□ 0.67
CSMD2Q7Z408 AC145350.3-201ENST00000569033 163 ntBASIC19.23■□□□□ 0.67
CSMD2Q7Z408 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 pRNA.6-201ENST00000610482 90 ntBASIC19.23■□□□□ 0.67
CSMD2Q7Z408 pRNA.5-201ENST00000612139 90 ntBASIC19.23■□□□□ 0.67
CSMD2Q7Z408 pRNA.11-201ENST00000618423 90 ntBASIC19.23■□□□□ 0.67
CSMD2Q7Z408 pRNA.13-201ENST00000619112 90 ntBASIC19.23■□□□□ 0.67
CSMD2Q7Z408 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CSMD2Q7Z408 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.23■□□□□ 0.67
CSMD2Q7Z408 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD2Q7Z408 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD2Q7Z408 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CSMD2Q7Z408 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD2Q7Z408 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD2Q7Z408 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSMD2Q7Z408 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSMD2Q7Z408 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CSMD2Q7Z408 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms