Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 AC133561.1-201ENST00000568600 2415 ntBASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 AL451085.2-201ENST00000605085 799 ntBASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HIST2H3AQ71DI3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 AC009299.2-201ENST00000482477 511 ntBASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 KRT125P-201ENST00000546827 989 ntBASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST2H3AQ71DI3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST2H3AQ71DI3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 MIR4787-201ENST00000607364 84 ntBASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 AC079630.1-202ENST00000618127 1840 ntBASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 AC005703.6-201ENST00000623265 1329 ntBASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST2H3AQ71DI3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 AC239859.2-201ENST00000444165 318 ntBASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H3AQ71DI3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST2H3AQ71DI3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HIST2H3AQ71DI3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H3AQ71DI3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HIST2H3AQ71DI3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HIST2H3AQ71DI3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H3AQ71DI3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H3AQ71DI3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H3AQ71DI3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H3AQ71DI3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST2H3AQ71DI3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms