Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 KRT18P10-201ENST00000388836 1287 ntBASIC14.24□□□□□ -0.13
LINC00575Q6W349 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 DUX4L11-201ENST00000611504 1267 ntBASIC14.24□□□□□ -0.13
LINC00575Q6W349 DUX4L12-201ENST00000614593 1267 ntBASIC14.24□□□□□ -0.13
LINC00575Q6W349 DUX4L14-201ENST00000621227 1267 ntBASIC14.24□□□□□ -0.13
LINC00575Q6W349 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00575Q6W349 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00575Q6W349 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00575Q6W349 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LINC00575Q6W349 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC00575Q6W349 HGH1-207ENST00000628266 258 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00575Q6W349 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00575Q6W349 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
LINC00575Q6W349 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC00575Q6W349 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00575Q6W349 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00575Q6W349 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC00575Q6W349 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00575Q6W349 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00575Q6W349 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00575Q6W349 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00575Q6W349 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00575Q6W349 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00575Q6W349 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00575Q6W349 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00575Q6W349 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00575Q6W349 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00575Q6W349 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00575Q6W349 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00575Q6W349 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00575Q6W349 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00575Q6W349 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 AC139530.1-201ENST00000575312 1977 ntBASIC14.2□□□□□ -0.14
LINC00575Q6W349 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00575Q6W349 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00575Q6W349 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC00575Q6W349 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00575Q6W349 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms