Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.31■■□□□ 1.32
FOXR1Q6PIV2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.31■■□□□ 1.32
FOXR1Q6PIV2 AC073130.3-201ENST00000624389 2278 ntBASIC23.31■■□□□ 1.32
FOXR1Q6PIV2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR1Q6PIV2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR1Q6PIV2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR1Q6PIV2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR1Q6PIV2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR1Q6PIV2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
FOXR1Q6PIV2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 AC087393.1-201ENST00000582896 145 ntBASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.26■■□□□ 1.31
FOXR1Q6PIV2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FOXR1Q6PIV2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 RPS2P7-201ENST00000447334 885 ntBASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
FOXR1Q6PIV2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXR1Q6PIV2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXR1Q6PIV2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
FOXR1Q6PIV2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXR1Q6PIV2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXR1Q6PIV2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
FOXR1Q6PIV2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
FOXR1Q6PIV2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FOXR1Q6PIV2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
FOXR1Q6PIV2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
FOXR1Q6PIV2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms