Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 AF213884.3-201ENST00000563833 479 ntBASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H3F3CQ6NXT2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 ZNRF2P3-201ENST00000424200 374 ntBASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
H3F3CQ6NXT2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 AC091305.1-201ENST00000479476 895 ntBASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
H3F3CQ6NXT2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H3F3CQ6NXT2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3F3CQ6NXT2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
H3F3CQ6NXT2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H3F3CQ6NXT2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
H3F3CQ6NXT2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.78■□□□□ 0.92
H3F3CQ6NXT2 LINC00543-201ENST00000567234 1845 ntBASIC20.78■□□□□ 0.92
H3F3CQ6NXT2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 RASA4CP-201ENST00000424092 1398 ntBASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
H3F3CQ6NXT2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
H3F3CQ6NXT2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 FP325331.1-202ENST00000623531 1380 ntBASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 AC027682.1-201ENST00000562846 899 ntBASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H3F3CQ6NXT2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 AC105265.2-201ENST00000467189 838 ntBASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 CA15P2-201ENST00000611168 834 ntBASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
H3F3CQ6NXT2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 AC093323.1-202ENST00000635031 2045 ntBASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H3F3CQ6NXT2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms