Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 AL035685.1-201ENST00000636663 812 ntBASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HIST2H2AA3Q6FI13 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST2H2AA3Q6FI13 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST2H2AA3Q6FI13 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
HIST2H2AA3Q6FI13 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HIST2H2AA3Q6FI13 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HIST2H2AA3Q6FI13 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HIST2H2AA3Q6FI13 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
HIST2H2AA3Q6FI13 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HIST2H2AA3Q6FI13 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HIST2H2AA3Q6FI13 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.64■■□□□ 1.05
HIST2H2AA3Q6FI13 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HIST2H2AA3Q6FI13 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIST2H2AA3Q6FI13 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HIST2H2AA3Q6FI13 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.05
HIST2H2AA3Q6FI13 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
HIST2H2AA3Q6FI13 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
HIST2H2AA3Q6FI13 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 AC079630.1-202ENST00000618127 1840 ntBASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 DUSP8P3-201ENST00000399571 1760 ntBASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HIST2H2AA3Q6FI13 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HIST2H2AA3Q6FI13 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HIST2H2AA3Q6FI13 UNC93B8-201ENST00000511903 705 ntBASIC21.61■■□□□ 1.05
HIST2H2AA3Q6FI13 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.61■■□□□ 1.05
HIST2H2AA3Q6FI13 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIST2H2AA3Q6FI13 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIST2H2AA3Q6FI13 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HIST2H2AA3Q6FI13 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms