Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
VARS2Q5ST30 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.98■■□□□ 1.43
VARS2Q5ST30 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VARS2Q5ST30 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
VARS2Q5ST30 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VARS2Q5ST30 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VARS2Q5ST30 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.97■■□□□ 1.43
VARS2Q5ST30 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VARS2Q5ST30 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VARS2Q5ST30 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.97■■□□□ 1.43
VARS2Q5ST30 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
VARS2Q5ST30 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VARS2Q5ST30 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VARS2Q5ST30 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VARS2Q5ST30 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
VARS2Q5ST30 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
VARS2Q5ST30 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VARS2Q5ST30 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VARS2Q5ST30 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.96■■□□□ 1.43
VARS2Q5ST30 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VARS2Q5ST30 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
VARS2Q5ST30 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
VARS2Q5ST30 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
VARS2Q5ST30 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
VARS2Q5ST30 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.95■■□□□ 1.42
VARS2Q5ST30 AC233992.3-201ENST00000607491 485 ntBASIC23.95■■□□□ 1.42
VARS2Q5ST30 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.95■■□□□ 1.42
VARS2Q5ST30 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VARS2Q5ST30 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VARS2Q5ST30 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.94■■□□□ 1.42
VARS2Q5ST30 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VARS2Q5ST30 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
VARS2Q5ST30 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
VARS2Q5ST30 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VARS2Q5ST30 BX842568.3-201ENST00000418104 571 ntBASIC23.94■■□□□ 1.42
VARS2Q5ST30 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.94■■□□□ 1.42
VARS2Q5ST30 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.94■■□□□ 1.42
VARS2Q5ST30 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
VARS2Q5ST30 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VARS2Q5ST30 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
VARS2Q5ST30 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.93■■□□□ 1.42
VARS2Q5ST30 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VARS2Q5ST30 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
VARS2Q5ST30 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VARS2Q5ST30 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VARS2Q5ST30 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VARS2Q5ST30 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
VARS2Q5ST30 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VARS2Q5ST30 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VARS2Q5ST30 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VARS2Q5ST30 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.92■■□□□ 1.42
VARS2Q5ST30 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.92■■□□□ 1.42
VARS2Q5ST30 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.92■■□□□ 1.42
VARS2Q5ST30 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VARS2Q5ST30 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
VARS2Q5ST30 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
VARS2Q5ST30 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VARS2Q5ST30 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VARS2Q5ST30 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VARS2Q5ST30 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VARS2Q5ST30 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
VARS2Q5ST30 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VARS2Q5ST30 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VARS2Q5ST30 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VARS2Q5ST30 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
VARS2Q5ST30 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VARS2Q5ST30 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
VARS2Q5ST30 LINC01124-201ENST00000409786 2117 ntBASIC23.9■■□□□ 1.42
VARS2Q5ST30 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
VARS2Q5ST30 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VARS2Q5ST30 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VARS2Q5ST30 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
VARS2Q5ST30 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.89■■□□□ 1.42
VARS2Q5ST30 LINC00543-201ENST00000567234 1845 ntBASIC23.89■■□□□ 1.42
VARS2Q5ST30 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.89■■□□□ 1.41
VARS2Q5ST30 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.89■■□□□ 1.41
VARS2Q5ST30 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.89■■□□□ 1.41
VARS2Q5ST30 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
VARS2Q5ST30 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
VARS2Q5ST30 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.89■■□□□ 1.41
VARS2Q5ST30 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
VARS2Q5ST30 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.88■■□□□ 1.41
VARS2Q5ST30 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VARS2Q5ST30 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
VARS2Q5ST30 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.88■■□□□ 1.41
VARS2Q5ST30 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
VARS2Q5ST30 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.88■■□□□ 1.41
VARS2Q5ST30 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VARS2Q5ST30 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
VARS2Q5ST30 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.87■■□□□ 1.41
VARS2Q5ST30 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.87■■□□□ 1.41
VARS2Q5ST30 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
VARS2Q5ST30 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.87■■□□□ 1.41
VARS2Q5ST30 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
VARS2Q5ST30 IRS3P-201ENST00000223076 1006 ntBASIC23.86■■□□□ 1.41
VARS2Q5ST30 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VARS2Q5ST30 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.86■■□□□ 1.41
VARS2Q5ST30 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.86■■□□□ 1.41
VARS2Q5ST30 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.86■■□□□ 1.41
VARS2Q5ST30 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms